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2012
Staňová A, Ďurišová E, Banásová V, Gurinová E, Nadubinská M, Kenderešová L,
Ovečka M, Čiamporová M (2012)
Root system morphology and primary root anatomy in natural non-metallicolous and metallicolous populations of three
Arabidopsis species differing in heavy metal tolerance.
Biologia 67, 505-516;
doi:10.2478/s11756-012-0040-y
Li R, Liu P, Wan Y, Chen T, Wang Q, Mettbach U, Baluška F, Šamaj J, Fang X, Lucas WJ, Lin J (2012)
A membrane microdomain-associated protein, AtFlot1, is involved in a clathrin-independent endocytic pathway and is required for seedling development in
Arabidopsis. Plant Cell, in-press;
doi:10.1105/tpc.112.095695
Takáč T, Pechan T, Šamajová O, Ovečka M, Richter H, Eck C, Niehaus K,
Šamaj J (2012)
Wortmannin Treatment Induces Changes in Arabidopsis Root Proteome and Post-Golgi Compartments.
J. Proteome Res., in-press;
doi:10.1021/pr201111n
Barbez E, Kubeš M, Rolčík J, Béziat C, Pěnčík A, Wang B, Rosquete MR, Zhu J, Dobrev PI, Lee Y, Zažímalová E, Petrášek J, Geisler M, Friml J, Kleine-Vehn J (2012)
A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants.
Nature 485, 119–122;
doi:10.1038/nature11001
Kasparek P, Krenek P, Buryova H, Suchanova S, Beck IM, Sedlacek R (2012) Transgenic mouse model expressing tdTomato
under involucrin promoter as a tool for analysis of epidermal differentiation and wound healing. Transgenic Res. 21, 683-689
;
DOI: 10.1007/s11248-011-9567-x
Unger C, Popescu R, Giessrigl B, Rarova L, Herbacek I, Seelinger M, Diaz
R, Wallnöfer B, Fritzer-Szekeres M, Szekeres T, Frisch R, Doležal K,
Strnad M, De Martin R, Grusch M, Kopp B, Krupitza G
(2012)
An apolar extract of Critonia morifolia inhibits c-Myc, cyclin D1, Cdc25A, Cdc25B, Cdc25C and
Akt and induces apoptosis.
Int. J. Oncol. 40, 2131-2139;
doi:10.3892/ijo.2012.1412
Wendel JF, Greilhuber J, Doležel J, Leitch IJ (eds.) (2012) Plant Genome Diversity, Vol. 1, pp. 279; Springer,
ISBN 978-3-7091-1129-1
Lucas SJ, Šimková H, Šafář J, Jurman I, Cattonaro F, Vautrin S, Bellec A, Berges H,
Doležel J, Budak H (2012)
Functional features of a single chromosome arm in wheat (1AL) determined from its structure.
Funct. Integr. Genomics 12, 173-182;
doi:10.1007/s10142-011-0250-3
Tomaszewski C, Byrne SL, Foito A, Kildea S, Kopecký D, Doležel J, Heslop-Harrison JS, Stewart D, Barth S (2012)
Genetic linkage mapping in an F2 perennial ryegrass population using DArT markers.
Plant Breeding 131, 345-349;
doi:10.1111/j.1439-0523.2011.01944.x
Yadav DK, Pospíšil P (2012)
Role of chloride ion in hydroxyl radical production in photosystem II under heat stress: Electron paramagnetic resonance spin-trapping study.
J Bioenerg Biomembr, in press;
doi:10.1007/s10863-012-9433-4
Sinha RK, Komenda J, Knoppová J, Sedlářová M, Pospíšil P (2012) Small CAB-like proteins prevent formation of singlet oxygen in the damaged
Photosystem II complex of the cyanobacterium Synechocystis sp. PCC 6803.
Plant Cell Environ 35, 806–818;
doi:10.1111/j.1365-3040.2011.02454.x
Cegan R, Vyskot B, Kejnovsky E, Kubat Z, Blavet H, Šafář J, Doležel J, Blavet N, Hobza R (2012)
Genomic diversity in two related plant species with and without sex chromosomes -
Silene latifolia and S. vulgaris.
PLoS ONE 7(2): e31898;
doi:10.1371/journal.pone.0031898
Berkman PJ, Skarshewski A, Manoli S, Lorenc MT, Stiller J, Smits L, Lai K, Campbell E,
Kubaláková M, Šimková H, Batley J, Doležel J, Hernandez P, Edwards D (2012)
Sequencing wheat chromosome arm 7BS delimits the 7BS/4AL translocation and reveals homoeologous gene conservation.
Theor. Appl. Genet. 124, 423-432;
doi:10.1007/s00122-011-1717-2
Fluch S, Kopecky D, Burg K, Šimková H, Taudien S, Petzold A,
Kubaláková M, Platzer M, Berenyi M, Krainer S, Doležel J, Lelley T (2012)
Sequence composition and gene content of the short arm of rye (Secale cereale) chromosome 1.
PLoS ONE 7(2): e30784;
doi:10.1371/journal.pone.0030784
Pérez-Díaz JOH, Rárová L, Muñoz Ocampo JP, Magaña-Vergara NE, Farfán N,
Strnad M, Santillán R (2012)
Synthesis and Biological activity of 23-Ethylidene-26-hydroxy-22-oxocholestane derivatives from spirostanic sapogenins.
Eur. J. Med. Chem. 51, 67–78;
doi:10.1016/j.ejmech.2012.02.020
Pospíšil P (2012) Molecular mechanisms of production and scavenging of
reactive oxygen species by photosystem II.
Biochim. Biophys. Acta 1817, 218-231;
doi:10.1016/j.bbabio.2011.05.017
Petrovská B, Cenklová V, Pochylová Z, Kourová H, Doskočilová A, Plíhal O, Binarová L, Binarová P (2012) Plant Aurora kinases play a role in
maintenance of primary meristems and control of endoreduplication. New Phytol. 193, 590–604;
doi:10.1111/j.1469-8137.2011.03989.x
Hulvová H, Galuszka P, Frébortová J, Frébort I (2012)
Parasitic fungus Claviceps as a source for biotechnological production of ergot alkaloids.
Biotechnol. Adv., in press;
doi:10.1016/j.biotechadv.2012.01.005
Zalabák D, Pospíšilová H, Šmehilová M, Mrízová K, Frébort I, Galuszka P (2012)
Genetic engineering of cytokinin metabolism: Prospective way to improve agricultural traits of crop plants.
Biotechnol. Adv., in press;
doi:10.1016/j.biotechadv.2011.12.003
Hernandez P, Martis M, Dorado G, Pfeifer M, Gálvez S, Schaaf S, Jouve N, Šimková H, Valárik M, Doležel J, Mayer KFX (2012)
Next-generation sequencing and syntenic integration of flow-sorted arms of wheat chromosome 4A exposes the chromosome structure and gene content.
Plant J. 69, 377-386;
doi:10.1111/j.1365-313X.2011.04808.x
Baird JH, Kopecký D, Lukaszewski AJ, Green RL, Bartoš J, Doležel J (2012) Genetic diversity of turf-type tall fescue using diversity arrays technology.
Crop Sci. 52, 408-412;
doi:10.2135/cropsci2011.02.0106
Uváčková Ľ, Takáč T, Boehm N, Obert B, Šamaj J (2012) Proteomic and biochemical analysis of maize anthers after cold pretreatment and induction of androgenesis reveals an important role of anti-oxidative enzymes.
J. Proteomics 75, 1886–1894;
doi:10.1016/j.jprot.2011.12.033
Šamajová O, Plíhal O, Al-Yousif M, Hirt H, Šamaj J (2012) Improvement of stress tolerance in plants by genetic manipulation of mitogen-activated
protein kinases. Biotechnol. Adv., in press;
doi:10.1016/j.biotechadv.2011.12.002
Bleho J, Obert B, Takáč T, Petrovská B, Heym C,
Menzel D, Šamaj J (2012) ER disruption and GFP
degradation during non-regenerable transformation of flax
with Agrobacterium tumefaciens. Protoplasma 249, 53-63;
DOI: 10.1007/s00709-010-0261-2
Aremu AO, Bairu MW, Doležal K, Finnie JF, Van Staden J (2012) Topolins: A panacea to plant tissue culture challenges?
Plant Cell Tissue Organ Cult. 108,1-16;
doi:10.1007/s11240-011-0007-7
2011
Průměrný impakt faktor časopisů, které uveřejnily články
Centra roce 2011, je 3,954. Časopisy s největším impakt faktorem (hodnocení za rok 2010),
ve kterých byly v roce 2011 publikovány články Centra, byly Current Opinion in Plant Biology (IF 9,437) a Plant Cell (IF
9,396), ve kterých byly
uveřejněny tři články.
Rustenholz C, Choulet F, Laugier C, Šafář J, Šimková H, Doležel J, Magni F, Scalabrin S, Cattonaro F, Vautrin S, Bellec A, Bergès H, Feuillet C, Paux E (2011)
A 3000-loci transcription map of chromosome 3B unravels the structural and functional features of gene islands in hexaploid wheat.
Plant Physiol. 157, 1596-1608;
doi:10.1104/pp.111.183921
Prasad A, Pospíšil P (2011)
Two-dimensional imaging of spontaneous
ultra-weak photon emission from the human skin: role of reactive oxygen species.
J. Biophotonics 4, 840-849;
doi:10.1002/jbio.201100073
Chen T, Wang X, von Wangenheim D, Zheng M, Šamaj J, Ji W, Lin J (2011)
Probing and tracking organelles in living plant cells.
Protoplasma, in press;
doi:10.1007/s00709-011-0364-4,
Erratum: doi:10.1007/s00709-012-0376-8
Karady M, Novák O, Horna A, Strnad M, Doležal K (2011) High Performance Liquid Chromatography-Electrochemistry-
Electrospray Ionization Mass Spectrometry (HPLC/EC/ESI-MS)
for Detection and Characterization of Roscovitine Oxidation
Products. Electroanalysis 23, 2898-2905;
doi:10.1002/elan.201100383
Petříková K, Neugebauerová J, Dušek K, Dušková E (2011) Metodika pěstování léčivých rostlin: puškvorce obecného, černohlávku obecného a smilu písečného.
Certifikovaná metodika pro praxi. Mendelova univerzita v Brně, ISBN 978-80-7375-523-2
Muñoz-Amatriaín M, Moscou MJ, Bhat PR, Svensson JT, Bartoš J, Suchánková P, Šimková H, Endo TR, Fenton RD, Lonardi S,
Castillo AM, Chao S, Cistué L, Cuesta-Marcos A, Forrest KL, Hayden MJ, Hayes PM, Horsley RD, Makoto K, Moody D, Sato K, Vallés MP, Wulff BBH,
Muehlbauer GJ,
Doležel J, Close TJ (2011)
An improved consensus linkage map of barley based on flow-sorted chromosomes and single nucleotide polymorphism markers.
Plant Genome 4, 238-249;
doi:10.3835/plantgenome2011.08.0023
Molnár I, Kubaláková M, Šimková H, Cseh A, Molnár-Láng M,
Doležel J (2011) Chromosome isolation by flow sorting in
Aegilops umbellulata and Ae. comosa and their allotetraploid hybrids
Ae. biuncialis and Ae. geniculata.
PLoS One 6(11): e27708;
doi:10.1371/journal.pone.0027708
Cseh A, Kruppa K, Molnár I, Rakszegi M, Doležel J, Molnár-Láng M (2011) Characterization of a new 4BS.7HL wheat-barley
translocation line using GISH, FISH, and SSR markers and its effect on the β-glucan content of wheat. Genome 54, 795-804;
doi:10.1139/G11-044
Mik V, Szüčová L, Spíchal L, Plíhal O, Nisler J, Zahajská L, Doležal K, Strnad M (2011) N9-Substituted
N6-[(3-methylbut-2-en-1-yl)amino]purine
derivatives and their biological activity in selected cytokinin bioassays. Bioorg. Med. Chem. 19, 7244–7251;
DOI: 10.1016/j.bmc.2011.09.052
Vitulo N, Albiero A, Forcato C, Campagna D, Dal Pero F,
Bagnaresi P, Colaiacovo M, Faccioli P, Lamontanara A, Šimková H,
Kubaláková M, Perrotta G, Facella P, Lopez L, Pietrella M, Gianese G,
Doležel J, Giuliano G, Cattivelli L, Valle G, Stanca AM (2011) First survey of the wheat chromosome 5A composition through a
next generation sequencing approach. PLoS One 6(10): e26421; DOI:
10.1371/journal.pone.0026421
Parlange F, Oberhaensli S, Breen J, Platzer M, Taudien S, Šimková H, Wicker T,
Doležel J, Keller B (2011) A major invasion of
transposable elements accounts for the large size of the Blumeria graminis f.sp.
tritici genome.
Funct. Integr. Genomics 11, 671-677;
doi:10.1007/s10142-011-0240-5
Christelová P, Valárik M, Hřibová E, Van den Houwe I, Channeliére S, Roux N,
Doležel J (2011) A platform for efficient genotyping in Musa using microsatellite markers. AoB PLANTS 2011 plr024,
in press;
DOI: 10.1093/aobpla/plr024
Zatloukalová P, Hřibová E, Kubaláková M, Suchánková P, Šimková H, Adoración C, Kahl G, Millán T,
Doležel J (2011) Integration of genetic and physical maps of the chickpea (Cicer arietinum L.) genome using flow-sorted chromosomes. Chromosome Res. 19, 729-739;
DOI: 10.1007/s10577-011-9235-2
Berkman PJ, Skarshewski A, Lorenc MT, Lai K, Duran Ch, Ling
EYS, Stiller J, Smits L, Imelfort M, Manoli S, McKenzie M,
Kubaláková M, Šimková H, Batley J, Fleury D, Doležel J,
Edwards D (2011) Sequencing and assembly of low copy and genic regions of
isolated /Triticum aestivum/ chromosome arm 7DS. Plant Biotechnol. J. 9,
768-775; DOI: 10.1111/j.1467-7652.2010.00587.x
Reiss K, Meyer-Hoffert U, Fischer J, Sperrhacke M, Wu Z, Dimitrieva O, Křenek P, Suchanova S, Buryova H, Brauer R,
Sedlacek R (2011) Expression and regulation of murine SPINK12, a potential orthologue of human LEKTI2. Exp. Dermatol. 20, 905-910;
DOI:10.1111/j.1600-0625.2011.01355.x
Pospíšil P (2011) Enzymatic function of cytochrome b 559
in photosystem II. J. Photochem. Photobiol. B-Biol.
104, 341-347;
DOI: 10.1016/j.jphotobiol.2011.02.013
Prasad A, Pospisil P (2011) Linoleic acid-induced ultra-weak photon emission from
Chlamydomonas reinhardtii
as a tool for monitoring of lipid peroxidation in the cell membranes. PLoS One 6, e22345;
DOI: 10.1371/journal.pone.0022345
Rastogi A, Pospíšil P (2011) Spontaneous ultraweak photon emission imaging of oxidative metabolic processes in human skin:
effect of molecular oxygen and antioxidant defense system. J. Biomed. Opt. 16, 096005;
DOI: 10.1117/1.3616135
Kyseláková H, Prokopová J, Nauš J, Novák O, Navrátil M, Šafářová D,
Špundová M, Ilík P (2011) Photosynthetic alterations
of pea leaves infected systemically by pea enation mosaic virus: A coordinated decrease in efficiencies of CO2 assimilation and photosystem II photochemistry. Plant Physiol. Biochem. 49,
1279–1289;
DOI: 10.1016/j.plaphy.2011.08.006
Komis G, Illés P, Beck M, Šamaj J (2011) Microtubules and mitogen-activated protein kinase
signalling. Curr. Opin. Plant Biol. 14, 650–657;
DOI: 10.1016/j.pbi.2011.07.008
Xu C, Zhao L, Pan X, Šamaj J (2011) Developmental Localization and Methylesterification of Pectin
Epitopes during Somatic Embryogenesis of Banana (Musa spp. AAA). PLoS One 2011;6(8):e22992;
DOI: 10.1371/journal.pone.0022992
Vleeshouwers V, Finkers R, Budding D, Visser M, Jacobs M, van Berloo R, Pel M,
Champouret N, Bakker E, Křenek P, Rietman H, Huigen D, Hoekstra R, Goverse A,
Vosman B, Jacobsen E, Visser R (2011) SolRgene: an online database to explore
disease resistance genes in tuber-bearing Solanum species. BMC Plant Biol. 11, 116;
DOI: 10.1186/1471-2229-11-116
Kopečný D, Tylichová M, Snégaroff J, Popelková H, Šebela M (2011) Carboxylate and aromatic
active-site residues are determinants of high affinity binding of ɷ-aminoaldehydes to plant
aminoaldehyde dehydrogenases. FEBS J. 278, 3130-3139;
DOI: 10.1111/j.1742-4658.2011.08239.x Kowalska M, Tian T, Šmehilová M,
Galuszka P, Frébort I, Napier R,
Dale N (2011) Prussian Blue acts as a mediator in a
reagentless cytokinin biosensor. Anal. Chim. Acta 701,
218-223;
DOI: 10.1016/j.aca.2011.06.018
Kryštof V, Rárová L, Liebl J, Zahler S, Jorda R,
Voller J, Cankař P (2011) The selective P-TEFb inhibitor CAN508 targets
angiogenesis. Eur. J. Med. Chem. 46, 4289-4294;
DOI: 10.1016/j.ejmech.2011.06.035
Mahelka V, Kopecký D, Paštová L (2011)
On the genome constitution and evolution of intermediate
wheatgrass (Thinopyrum intermedium: Poaceae,
Triticeae). BMC Evol. Biol. 11, 127;
http://dx.doi.org/10.1186/1471-2148-11-127
Pan X, Yang X, Lin G, Zou R, Chen H, Šamaj J,
Xu C (2011) Ultrastructural changes and the distribution of
arabinogalactan proteins during somatic embryogenesis of
banana (Musa spp. AAA cv. ‘Yueyoukang 1’). Physiol. Plant. 142, 1399-3054;
DOI: 10.1111/j.1399-3054.2011.01478.x
Wicker T, Mayer KFX, Gundlach H, Martis M, Steuernagel B,
Scholz U, Šimková H, Kubaláková M, Choulet
F, Taudien S, Platzer M, Feuillet C, Fahima T, Budak H,
Doležel J, Keller B, Stein N (2011)
Frequent gene movement and pseudogene evolution is common to
the large and complex genomes of wheat, barley, and their
relatives. Plant Cell 23, 1706-1718;
DOI: 10.1105/tpc.111.086629
Xie D, Ma L, Šamaj J, Xu C (2011) Immunohistochemical
analysis of cell wall hydroxyproline-rich glycoproteins in
the roots of resistant and susceptible wax gourd cultivars
in response to Fusarium oxysporum f. sp.
Benincasae infection and fusaric acid treatment. Plant Cell Reports 30, 1555-1569;
DOI: 10.1007/s00299-011-1069-z
Jorda R, Havlíček L, McNae IW, Walkinshaw MD, Voller J,
Šturc A, Navrátilová J, Kuzma M, Mistrík M, Bártek J,
Strnad M, Kryštof V (2011) Pyrazolo[4,3-d]pyrimidine
bioisostere of roscovitine: evaluation of a novel selective
inhibitor of cyclin-dependent kinases with antiproliferative
activity. J. Med. Chem. 54, 2980-2993; DOI:
10.1021/jm200064p
Maj J, Morzycki JW, Rárová L, Oklešťková J,
Strnad M, Wojtkielewicz A (2011) Synthesis and
biological activity of 22-deoxo-23-oxa analogues of saponin
OSW-1. J. Med. Chem. 54, 3298-3305;
DOI: 10.1021/jm101648h
Mrózek L, Dvořáková L, Mandelová Z, Rárová L,
Řezáčová A, Plaček L, Opatřilová R, Dohnal J, Král V, Drašar
P, Jampílek J (2011) Investigation of new acyloxy
derivatives of cholic acid and their esters as drug
absorption modifiers. Steroids 76, 1082-1097; DOI:
10.1016/j.steroids.2011.04.014
Doskočilová A, Plíhal O, Volc J, Chumová J, Kourová H, Halada P,
Petrovská B, Binarová P (2011) A nodulin/glutamine synthetase-like
fusion protein is implicated in the regulation of root morphogenesis and in signalling triggered by flagellin.
Planta 234, 459-476;
doi:10.1007/s00425-011-1419-7
Mayer KFX, Martis M, Hedley P E, Šimková H, Liu H, Morris JA, Steuernagel B, Taudien S, Roessner S, Gundlach H,
Kubaláková
M, Suchánková P, Murat F, Felder M, Nussbaumer T, Graner A, Salse J, Endo TR, Sakai H, Tanaka T, Itoh T, Sato K, Platzer
M, Matsumoto T, Scholz U, Doležel J, Waugh R, Stein N (2011) Unlocking the barley genome by chromosomal and comparative genomics.
Plant Cell 23, 1249-1263;
doi:10.1105/tpc.110.082537
Christelová P, Valárik M, Hřibová E, De Langhe E,
Doležel J (2011) A multi gene sequence-based phylogeny of the Musaceae (banana) family. BMC Evol. Biol. 11, 103;
doi:10.1186/1471-2148-11-103
Hřibová E, Čížková J, Christelová P, Taudien
S de Langhe E, Doležel J (2011) The ITS1-5.8S-ITS2
sequence region in the Musaceae: structure, diversity and
use in molecular phylogeny. PLoS One 6(3), e17863;
DOI: 10.1371/journal.pone.0017863
Bartoš J, Sandve SR, Kölliker R, Kopecký D,
Christelová P, Stočes Š, Ostrem L, Larsen A, Kilian A,
Rognli O-A, Doležel J (2011) Genetic mapping of DArT
markers in the Festuca–Lolium complex and their use in
freezing tolerance association analysis. Theor. Appl. Genet.
122, 1133-1147; DOI:
10.1007/s00122-010-1518-z
Mik V, Szüčová L,
Šmehilová M, Zatloukal M,
Doležal K, Nisler J, Grúz J,
Galuszka P, Strnad M,
Spíchal L (2011) N9-substituted derivatives
of kinetin: Effective anti-senescence agents. Phytochemistry
72, 821-831; DOI:
10.1016/j.phytochem.2011.02.002
Takáč T, Pechan T, Richter H, Müller J, Eck C,
Böhm N, Obert B, Ren H, Niehaus K, Šamaj J (2011)
Proteomics on brefeldin A-treated Arabidopsis roots reveals
profilin 2 as a new protein involved in the cross-talk
between vesicular trafficking and the actin cytoskeleton. J.
Proteome Res. 10, 488-501;
DOI: 10.1021/pr100690f
Beck M, Komis G, Ziemann A, Menzel D, Šamaj J
(2011) Mitogen-activated protein kinase 4 is involved in the
regulation of mitotic and cytokinetic microtubule
transitions in Arabidopsis thaliana. New Phytol. 189,
1069-1083;
DOI: 10.1111/j.1469-8137.2010.03565.x
Konieczny R, Obert B, Bleho J, Novák O, Heym C, Tuleja M,
Müller J, Strnad M, Menzel D, Šamaj J (2011)
Stable transformation of Mesembryanthemum crystallinum
(L.) with Agrobacterium rhizogenes harboring the
green fluorescent protein targeted to the endoplasmic
reticulum. J. Plant Physiol. 168, 721-729;
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Frébort I, Kowalska M, Hluska T,
Galuszka P, Frébortová J (2011) Darwin Review.
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Bot. 62, 2431-2452;
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Chamrád I, Strouhal O, Řehulka P,
Lenobel R, Šebela M (2011) Microscale
affinity purification of trypsin reduces background peptides
in matrix-assisted laser desorption/ionization mass
spectrometry of protein digests. J. Proteomics 74, 948-957;
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Xu C, Takáč T, Burbach C, Menzel D,
Šamaj J (2011) Developmental localization
and the role of hydroxyproline rich glycoproteins during
somatic embryogenesis of banana (Musa spp. AAA). BMC Plant
Biol. 11, 38;
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Takáč T, Pechan T, Šamaj J
(2011) Differential proteomics of plant development. J.
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2010
Tarkowski P, Floková K, Václavíková K, Jaworek P,
Raus M, Nordstrom A, Novák O, Doležal K, Šebela M,
Frébortová J (2010) An improved in vivo
deuterium labeling method for measuring the biosynthetic
rate of cytokinins. Molecules 15, 9214-9229;
DOI:10.3390/molecules15129214
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Centrum regionu Haná
